rs50346163 SNP Detail

Summary

• ID
  rs50346163
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:41768423 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCTTGACTG AAAGTAGAAA
  ATATTATATA AGAAAAACTG AGACCGATTA GAATAGCTAA ATTAGACAAT CTTTAAATAA
  AAACACTGCA ATGGTACAAA AATTGAGATC CTTGTTTTTT GCTTTAACTT CTAATAACAA
  TTGTGGGGGT TCACAGGATG TAAGCAGGAA TATGTGATGC AATGTCTATA TTTGAATAAA
  Y
  AACGCTTATG CCCAATACCC TAGCCTGCTC AGGGACATCT GAATGTCCCA GATCCAGAAG
  CTAAAGAAGC TAAAGGTTAG CCTTAGTGCA TGGCTTCACC TTCAGGGCCC GGCTTGAACT
  CTGCTCAAGC TGTTCCCATG GTTCAGTGTT GAATGTCATT GAGAATAGAG CTGTTGAGTA
  AGTGACAGTA ATGGGGGAGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147730635	ENSMUSSNP3925355	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50346163					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:41768423 () rs orientation: forward

Symbol	Name	Function Class
Rr390657	regulatory region 390657	within coordinates