rs50346980 SNP Detail

Summary

• ID
  rs50346980
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:19298491 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TATCAGGACC AGCAAGACCA GCCAGTGATA CCACACCCCT
  TCCGTGTCGG TGACACTGTG TGGGTACGCC GGCACCAGAC TAAGAACTTG GAACCTCGCT
  G
  GAAAGGACCC TACACCGTCC TGCTGACCAC CCCCACCGCT CTCAAAGTAG ACGGCATCGC
  TGCGTGGATC CACGCCGCTC ACGTAAAGGC GGCGACAAC                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss137247545	ENSMUSSNP4259818	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50346980					SNP	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:19298491 () rs orientation: forward

Symbol	Name	Function Class
Gm40843	predicted gene, 40843	12 bp downstream
Gm51522	predicted gene, 51522	12 bp downstream