rs50350482 SNP Detail

Summary

• ID
  rs50350482
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:46250655 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTGGGCAGG AGTGGCCTTG
  GGGAAACCAA GCATCTTTGT CCGACTGCAG TTTCTGCATC CAGAACGTGA CAGGACATCT
  CATTTCTTCT CTTGATGCTA AGTTAATTTT GAGTTTTCTG TGTGCCAGGC ACTGTGCCAG
  GAAGAGTCGG GCACATTACA ATATAAGCGC TCCTGTGGAA GACTGAGGCC CTGGTTGGGT
  M
  GGACTGAGGA GAGAGGTTTA TAGCAGTGAG CAGAGAGGGG GCCAGGTTTG ACTGGGATTT
  GAAGGCTGGC TCATAGTCTG ACATGGTGGC CCACTCCTTT AATCCTAGCA CTTAGAGGCA
  GAGGCAGAGG CCAGAGGAGG CAGAGGAGGC AGAGGAGGCA GAGGCAGAGG CAGAGAGGCA
  GAGAGGCAGA GAGAGGCAGA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss61392151	NES16761218	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	C	A	A	C	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs50350482					SNP	A	A	A	A	A	C	A	A	C	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61392151	NES16761218	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:46250655 () rs orientation: forward

Symbol	Name	Function Class
Rr383308	regulatory region 383308	190 bp downstream
Rr678124	regulatory region 678124	1416 bp distal
Rr678125	regulatory region 678125	711 bp distal