rs50352934 SNP Detail

Summary

• ID
  rs50352934
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:153795473 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGGCAAGTG ACATGAGCCA
  TAGAGAGCAG CTTGACCAAA GCTCAGGTGG CCTCCTGGGG CACTGCTGCT CTGGGGACAC
  AGTTCCAGCT GCCTTGGGGC CTCTGAAGGA GGCATTACTA AGTCTCAGAG ACATTGCCTC
  TTTTGGTTGG GTTTTTGGAC CCCAAGTTTC TCTGGGAAAA CATCCTGAAA ATCTCTATGA
  G
  TAACCAGTTG GCCAAATGTC TGATTAGTTG GTGTTCATGA CCTTTTTGTT CATGGACCAA
  GAGTTCGTAC AGAAGACTAT CAGCCCTCTT GTGTCTTCTT AGGCATAATC GCCCTCATCC
  GAGCCATGAG CAAAATCTGC TTGAGAAGCA GTTGCTTCCC ATGCCCTCTG AAAGTGTCCA
  AGGGCTTGTG CAGTGTCCAG                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss148011266	ENSMUSSNP759222	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs50352934					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:153795473 () rs orientation: forward

Symbol	Name	Function Class
Bpifb4	BPI fold containing family B, member 4	Intron
Rr567759	regulatory region 567759	232 bp distal
Rr567760	regulatory region 567760	460 bp distal
Rr567761	regulatory region 567761	443 bp proximal