rs50358224 SNP Detail

Summary

• ID
  rs50358224
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:67011979 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GACACACAGT AGGTGTGGCT ATCTATGTGG TCTTACTCAA
  TGGTCATCTC TGGGACGGGT GTGACCATCA GATGAGGCCC CTGGCAGGGG AGCCCATGGT
  R
  GAGAAGCCTG CCCAACGCCA TGTGGTCAAA AGAGGAGTGG GAGCTTCAGT CTCCAGCAGA
  AACCTTTCAG TCTTGATAGA GTCTGACTGA CTCATCTAG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss136577309	ENSMUSSNP6174275	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
ss322989571	CHEV_9_66952504	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs50358224					SNP	G	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:67011979 () rs orientation: forward

Symbol	Name	Function Class
Gm10646	predicted gene 10646	within coordinates
Gm22145	predicted gene, 22145	342 bp downstream
Rr681876	regulatory region 681876	1183 bp proximal