rs50360853 SNP Detail

Summary

• ID
  rs50360853
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:48191673 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGATATTAGA ACCTGAGGAC
  AGTGAGAAGG GAATCCTTAT GAGTGGATGA GCTGGTGGGT TGCCAGAGAA AATGCAGGTG
  GGAAGTACAG CCCAGGATGG AGGGAGGGTC AGAGCCCATG TGTACTGAGA AGAGCATCTA
  TGGTGAAGCA GGCTAGGAAC TGGGCACAGG GAGACAAGGG CTGAGCAGGA TGAAGAAGAA
  R
  CTATGCACAG GGTGCCTTAC AGTAGAGCCT AAGAGTGTTT CTGCAGAGGA GATGGACTGT
  AGAGGTGGTT GAGACCAAGC ATGTTTTAGA ACGGGGATCG TGAGTTTGGA GAGGAGATGA
  TACAAAACAG AAGCATAGAG TGCATAGATG TTTAAAATAG TGAAGAGGGC CTGCGAAGAT
  GGCACGGTTG GTAAAGTGTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61394846	NES16768809	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs50360853					SNP	G	G	G	G	G	G	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61394846	NES16768809	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:48191673 () rs orientation: forward

Symbol	Name	Function Class
Gm51672	predicted gene, 51672	within coordinates
Nxpe4	neurexophilin and PC-esterase domain family, member 4	within coordinates
Rr203996	regulatory region 203996	1977 bp proximal