rs50361500 SNP Detail

Summary

• ID
  rs50361500
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:3646597 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGTTCTTTC CTTCCACTGT
  GTGGGTCTTG GAGATGGAAC TCAGGTTGTC TGGCTTTATG GCAATGTTGA GCCATGTTAT
  TGACCACTTT TCTTTTTTTT TTTTTTTCTT TTTTTTTTTT TTTTTAAAGA TGAGGGCCTC
  CCAGTAGCCC TGGCTAGCTT TGACAGCAAT CACATGGGCC ACCATACTCA GCTTTTGGTG
  G
  GCATTTTGAA TCAGGGTGTC CTAGCACTCA CTGGCTTGTT ACTGCTTCTA GCCTGGGCTG
  GTGTGAAGCT CCTTTCTCAG TTTCCCAAGG CGAGGATTAC AGCTGTACAT GTTGGGCCTG
  GCTAAGTACC CTTTAAGTAT GGCTGAACTC AGTATTCTCT TAAGACCCTA CTCCTTATGC
  CCTCTGCTTT GAGAGTACCC                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss148546618	ENSMUSSNP285108	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs50361500					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:3646597 () rs orientation: forward

Symbol	Name	Function Class
Camsap3	calmodulin regulated spectrin-associated protein family, member 3	within coordinates
Rr180906	regulatory region 180906	397 bp distal
Rr189485	regulatory region 189485	1804 bp proximal
Rr381636	regulatory region 381636	826 bp upstream
Tssr76064	transcription start site region 76064	73 bp downstream
Tssr76065	transcription start site region 76065	1718 bp upstream
Tssr76066	transcription start site region 76066	1742 bp upstream
Tssr76067	transcription start site region 76067	1757 bp upstream
Tssr76068	transcription start site region 76068	1774 bp upstream
Tssr76069	transcription start site region 76069	1846 bp upstream
Tssr76070	transcription start site region 76070	1996 bp upstream