rs50362245 SNP Detail

Summary

• ID
  rs50362245
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:143971833 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATTGGGGTG GCTGCAACAC
  AAGTAGAAAA GTCTTCCTAA TACAAACCAT CAAAGTACAC ATATGTAAAA CAGAATTGTG
  ATCCTCTAGG GCATTCTAGC TATAAGGTCA CCAAGGTGCT GCAATGCTAT GACTTATTTC
  TTCTCACCTC TGCTTTACTC TGCATTGGTT TTAGTTGAGG CAGAGAGTCT CATCCTGTGT
  R
  GGACAGGAAG CTACCAGCAG CTTCAAGTGT ACAAGGACCT TTTTTTACCA AGGAAACCTA
  GAAAAACAGA TACCCTTGTG GTTCCCAGAG AGCATTCAAT TCCTCAAAAG GACTCTTAAG
  ATCTTCTTGG GTCACTTGTT GACTACAGGG CCTCGTTATT TGATTGACAG CCCTACTAGA
  GTCTCAAGGA ATGTGAGAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss136029568	ENSMUSSNP1659997	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs50362245					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:143971833 () rs orientation: forward

Symbol	Name	Function Class
Rr74711	regulatory region 74711	1074 bp distal
Rr74712	regulatory region 74712	642 bp proximal