rs50363750 SNP Detail

Summary

• ID
  rs50363750
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:37134045 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCTGTTTTA GTACGCATTG
  CAATTCGCTT TGTGAAGTTG AGTGCTGATC TTTGTGTCTA CACCACATTC CGTTCATTTG
  TATCTACACT GATGGATGCA TGGTGTTTTC AGCTACTGTG ACTGTTGTGA GCATGGGTGT
  ACAGATATTT TCAAGACTCT GCTTTCAGAT CTGTTGAGGC TACACTCAGA TGTGGGCTTG
  T
  TAGAGACATG TGCACATTGT GTGTGTTTGT CACCCTTCGG GAAAATTAAC TTACACACTG
  ATGGGTGGTG TCAGCAGGAA AGGTGCTTCT TACAAGTCTA GGGTCCCAAC CTAGGCACTG
  CAAACTGTTA GGCCTCCTGG GGCGTTGTAA TTGCCAGAAG GATTAAGAAA CTGTGACCTA
  ACACAGGCAC TTGTCCATTC                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss147623120	ENSMUSSNP1937575	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs50363750					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:37134045 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7042	CpG island 7042	1559 bp proximal
Gm34820	predicted gene, 34820	1845 bp upstream
Gm41301	predicted gene, 41301	within coordinates
Gm41302	predicted gene, 41302	within coordinates
Gm63629	predicted gene, 63629	179 bp downstream
Rr714	regulatory region 714	562 bp proximal
Rr302626	regulatory region 302626	within coordinates
Tssr134082	transcription start site region 134082	1950 bp downstream