rs50364092 SNP Detail

Summary

• ID
  rs50364092
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:135661891 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCTGACAGGG CTAGGCTGTA GATGCCAACC AGCGGCATGG
  CTTCTACAGT GCTGTCCCAC TATCCATTCT CATTTAGGCA TCAGAATAGG GGAGTGCTCC
  R
  GTTTAGGGAT AAACAGATGA AGTTGAGAAG TGCACAGTCT AGGAAGAGGT GCACTGCTCC
  ATTTAACCCC AGCTCCAATC TCCTAAGCAC TGGGCACAG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss145544356	ENSMUSSNP2528358	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs50364092					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:135661891 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Csrp1	cysteine and glycine-rich protein 1			Intron
				Noncoding-Transcript-Variant
Rr419257	regulatory region 419257			1007 bp distal
Rr419258	regulatory region 419258			within coordinates