rs50366532 SNP Detail

Summary

• ID
  rs50366532
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:90694786 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGACTAATA GAGAGTAGGG
  AGATATATAT ATTTTTTTCT GGTCTGTACC CTGCAGTCTT CAGATGACGA TGGAATCACA
  AAGGTCAAAG TTAGTAATGA CTGAAATGTG AGCCTTCTAA CTGTGTTTTA GTCTCTCTGG
  TCATTCATTG TTTTTTCTTT CCCTCATGAT GCCTTACCTT GAAGAGCAAG TGCTTCTGGG
  M
  TCATTTATCA TCTCGAGGCG ATCTTTGCAG CAATGGTCTC AGGCAGCACT TTATTACCTG
  TGTTCTGAAG AATTCTCGTC TTAAGTGATG ATCCAGGAGA CGAGCACTTC TGCTGCTGGA
  AGGGTGCTGC ACACTACATT CTTTCTAGGT TGGTTCTAGC CCATGTTCAT GTTCTAAAGA
  TCCTGGAAAG TCTTGCATTA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss132592513	ENSMUSSNP3303537	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs50366532					SNP	C	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:90694786 () rs orientation: forward

Symbol	Name	Function Class
4930405D11Rik	RIKEN cDNA 4930405D11 gene	732 bp upstream
Rr237710	regulatory region 237710	815 bp proximal
Rr253892	regulatory region 253892	762 bp distal
Tssr104130	transcription start site region 104130	722 bp upstream