rs50366989 SNP Detail

Summary

• ID
  rs50366989
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:52030442 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACACTAGTA ATGATGCTCT
  GTTATGTATG CAGACAAGAG CCTAGCATAA TTGTCCTATG AGAGGACTGA AAAGACACAG
  ATATGCACAG CCAAACACTA AATGGATCAG AGAGTCTTAT GGAAGAGCTG GGGGCAAGAT
  TGAGGAACCC GAAGAGGATA GGAAATCCAC AGAAAGACCA AGAGAGTTAG CTAACCTGAA
  Y
  CCTTGGGAAC TCTCAGAGAC TGAACGATCA ACCAAAGAGC ATACATGGGC TAGACTTGGG
  CCTCCCTGCA CATATGTAGC AGATATGCAA CTCTGTCTTC ATGTGGGTCC CCCAACAACT
  GGATCACAGG CTGTCCCTAA AGCTGTTGCC TGCCTGTGGA TCCCATTTCC CTAACTGGGC
  TGTCTTGTCT AGCCTCAGTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss137728961	ENSMUSSNP3937676	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50366989					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:52030442 () rs orientation: forward

Symbol	Name	Function Class
Rr387211	regulatory region 387211	within coordinates