rs50369724 SNP Detail

Summary

• ID
  rs50369724
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:163436471 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACCAAACCA AATCATATGG
  TAATAACTAC AGTTAGTTCT TGGCAACCAC ACAGAGATGT GTGTATCTGC TTTTCCTCAG
  TGTTTCAGGC GACATGCAGA ATGCATGTTA TTTCATTATC TTCTCCTTTT CCCTACTATG
  ATGAACTTTG GGGACCTCCT ATGTAGTTAA CATAGTGGGT CAGAAAGTGC TTAATTCAAA
  S
  TCACCAAGCC CTTGGAACCC CCTGTCTCTG CCTCCACTGC ACAGGGTTAC AGCTGCACAC
  TACCTCGCCT GGCTTTTGTT TGTTATGTTT GTTGTATCGG TGTTTTGCTT GCATGAGTGT
  CTGTGCACTG TGCCCATGGA GGCCCAGAGA GGACATCAGA GCCGCTAAAA CTGGAGTTAC
  AGACAGTTGT GAGCTCCACA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148206250	ENSMUSSNP7025074	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50369724					SNP	C	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:163436471 () rs orientation: forward

Symbol	Name	Function Class
Rr374198	regulatory region 374198	81 bp downstream
Rr569427	regulatory region 569427	195 bp distal
Rr569428	regulatory region 569428	479 bp proximal