rs50372282 SNP Detail

Summary

• ID
  rs50372282
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:114229381 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTAACTCTCA TAAAACAAAA
  CATTTAACTG GGGCTTGCTT ACAGTTGAGA GGTCTTAGTC CGTTATCACC CTGGCAGGGA
  GCATGGTGGC ATGGTGCTGG AGGTAGTAAC TGAGAATTCT CTATCCAGAA CTGCAAGAAG
  AGAGAGACTG TGGGCTTGGA ATGGGGTCTT GGAAACCTCA AAGCCCACCC TCGTAACACA
  M
  TTCCCCCCAA AAGGTCACAA CCCTAATCCT TTAAAAGTTT AAATCCTCCC CACCCCACTC
  CCCCACCCCC ACCCCAGATG ATTAAATCAA GTCTATGAGC TTACTGGGGC TATCTTCATT
  CAAACCACCA CAGCCTGCTT CTTGTCCAGT TATTTTTCCA GGTGACCCAA CAGTGGTACA
  AACAGTCTAT ATGTGGTAGA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	MSM/Ms
ss145296663	ENSMUSSNP200218	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	MSM/Ms
rs50372282					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:114229381 () rs orientation: forward

Symbol	Name	Function Class
Arl15	ADP-ribosylation factor-like 15	within coordinates
Rr278345	regulatory region 278345	1334 bp proximal
Rr282444	regulatory region 282444	1181 bp distal