rs50374979 SNP Detail

Summary

• ID
  rs50374979
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:10295362 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T TAGGTCAGGT CCAGTGGATG ATGTGTGTCT TCGAGCCCCT
  TTAGGTAAAA GAATACAAAA ATACTTTCAT GTGAGAATTC AAAGAGTGTA GGCAGACCAC
  S
  AAGAGAGAGA CCATGCCTGG AAACTACTGA CACCAGAAAG AGTTTGTTCT GGGCTTGAGA
  TGCCTCCACA GTGGGTCTCA GTTCTACCAG TACTCTAGAG A                    
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	MSM/Ms
ss147830249	ENSMUSSNP6586358	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	A/J	MSM/Ms
rs50374979					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:10295362 () rs orientation: forward

Symbol	Name	Function Class
Speer1c	spermatogenesis associated glutamate (E)-rich protein 1C	within coordinates