rs50381243 SNP Detail

Summary

• ID
  rs50381243
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:47691178 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGCGGCTC CAGTGTTCAT
  AAGAGCAGAG TGTTCCTAGG GAGAAACTGG CATTTCATTT CAAAAGTTAT CCTATAAAGA
  AATTCTGTGG GGTGTAGTGA CTTGTATCTG AACCATGTGG CCACAAACAT ATTATCAGTA
  TGTCTGTGTG TTAACCTATT CTTTGGTCTA GAATGCCATT CTGCATTCTT TGAGATCACC
  R
  TGTTTAGTGA AATAAGCCTG CTCAAAGATA TAGTATGGTA GGGTATCAGT CCTCAGCTTG
  TCACTATTGA GAGGTTTTGG AGCTTTTATG AGGTGGGCTC AGGAGAAGGT TATTAGAGGT
  ATGTCCTGAT GAGAGCTGTC GATTCTCATC TTGACTTCTT TCTTTGGCTT TCTGACCACA
  AGATGCACAG TCTTGGTTTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61788742	NES17713103	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	G	A	A	G	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs50381243					SNP	A	A	A	A	G	A	A	G	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61788742	NES17713103	PERLEGEN	MM_PANEL	f	SNP	A/G