rs50386825 SNP Detail

Summary

• ID
  rs50386825
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:45654193 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCACAGTTTC GGAGGTTCAG TCCATTATCA TCATGGCAGG
  AAGCATGGCA GCATGTAGGC AGATACGGTG CTGGAGGAGC TGAGAGTTTT ACATTTTGAT
  M
  TGAAGGCAGC CAGGAGGAGA CTCTCTTCCA TACTGGGAGG AGCTTGAGCC CTAAGAGACC
  TCAAAACCCA CCTACCCAGT GACACATTTC TCCCAATAA                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148964301	ENSMUSSNP1975159	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50386825					SNP	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:45654193 () rs orientation: forward

Symbol	Name	Function Class
Rr283739	regulatory region 283739	193 bp distal
Rr283740	regulatory region 283740	1209 bp proximal