rs50389403 SNP Detail

Summary

• ID
  rs50389403
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:174888076 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAGTC TCTTCATCCC ACTTTCAACC
  C
  GCTAACATCG TTCTGTCATC CACAA                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss146304468	ENSMUSSNP6500520	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss320146769	CHEV_1_176990641	CHEVERUD	SCREENING_POP	f	SNP			C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs50389403					SNP	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:174888076 () rs orientation: forward

Symbol	Name	Function Class
6330418B08Rik	RIKEN cDNA 6330418B08 gene	1447 bp downstream
Rgs7	regulator of G protein signaling 7	Intron