rs50391670 SNP Detail

Summary

• ID
  rs50391670
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:164380255 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTCCAACACC TATCCTTCCC TGTAGTCAAC TTCATTTTGA
  CACCTGGGAA TGAAGAAGGG AGGCTGCTGG AAAGTCTCCA CCCAGGATAA GTTGGAGGGA
  Y
  AGAGGAGTTT GAGTCAGAGT CTTTTTAAAG CTATGACCTT CAAAACGTCC TTGAACTCTG
  GATGCCCCTC ACACTCAGTG TAGAAAGCAG TTCTGCATT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145981085	ENSMUSSNP3642365	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50391670					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:164380255 () rs orientation: forward

Symbol	Name	Function Class
Gm70527	predicted gene, 70527	1380 bp downstream
Rr372378	regulatory region 372378	within coordinates
Rr422240	regulatory region 422240	1402 bp distal
Rr422241	regulatory region 422241	within coordinates