rs50401069 SNP Detail

Summary

• ID
  rs50401069
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:73549785 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A TTCCACATTG CACTCTGAGC ATGTTTCTGT TGTTGCATCT
  CCACTTGCAT ACAAATTGAT ACAATTGTCA TTTAGTCATT GTTCCATTGC AAACATTCCA
  R
  ATCTTTCCGT GGCTACTTCT GCTTTGACTT CTCACCTGTG TTTTTATGGC ATCTCTTTGT
  CCTTGCCGTT CCTTGGGGTC TCTTCCACCA TCTAGAGATT T                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss144676732	ENSMUSSNP6586810	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs50401069					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:73549785 () rs orientation: forward

Symbol	Name	Function Class
Gm9553	predicted gene 9553	1420 bp upstream
Rr371511	regulatory region 371511	610 bp upstream