rs50409615 SNP Detail

Summary

• ID
  rs50409615
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:113019735 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTGAAGCCA AAGCCCCATT
  TCCTTACAGT ACTCTATCTG CGGATGTAAG GTCAGACTGC CAGAAGGTTT GGGGACCCCT
  GAAGCCCCTT TTCTTGGTTT GCAGAAGGCC ACATTCATGC TGTGCCCTGC GGTGGCCATT
  TCTATATACT CACAAGCCAC TGGTACTGGG GGATCTTTTG TTTCTTGCTG GGTTGTTGGT
  R
  CTTTATTGTT TTGTCATTGT TAGGTATGCT GCTGTTACTG TCCATGGTGC TAAGAATCTA
  ACATAAGGTT TTGTGCAAGT TAGTTACATC CCAAGTTCTT TTTTTTTTTT AAGTAAGAAC
  TCTATCCATG AGACTTCCTT CAATTGCTTT TATAGAGACA CTGTCTCCAA AATCAATTAC
  ACTTGAGCCG CTCCTTCACC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss136986087	ENSMUSSNP2182282	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50409615					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:113019735 () rs orientation: forward

Symbol	Name	Function Class
Gm4657	predicted gene 4657	852 bp upstream
Rr383929	regulatory region 383929	249 bp upstream
Rr687465	regulatory region 687465	529 bp proximal