rs50410383 SNP Detail

Summary

• ID
  rs50410383
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:106104825 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGAAATCCTT GGATGCTCTT TGGAATAAGT ACAAGGATAA
  GTCAATGATG TAGTCTCTGG TAAATGTGTA GTCTCCCTCA CAGGGTTCAG ATTTCAGCTC
  G
  TTTTCTATGA TCTTCAAGAT TTCATGAAAG TAATTGTGAC TGTAATCACG CTTTTGCTTC
  CAAATGTTTT TAAGTGTTTC TGAAAATTTT AACCAAATG                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145614804	ENSMUSSNP4666575	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50410383					SNP	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:106104825 () rs orientation: forward

Symbol	Name	Function Class
Gm72977	predicted gene, 72977	within coordinates
Gvin-ps7	GTPase, very large interferon inducible, pseudogene 7	within coordinates
Tssr68401	transcription start site region 68401	1980 bp downstream
Tssr74119	transcription start site region 74119	1647 bp upstream
Tssr74120	transcription start site region 74120	1630 bp upstream
Tssr74121	transcription start site region 74121	1567 bp upstream
Tssr74122	transcription start site region 74122	1550 bp upstream
Tssr74123	transcription start site region 74123	1517 bp upstream
Tssr74124	transcription start site region 74124	1472 bp upstream
Tssr74125	transcription start site region 74125	1461 bp upstream
Tssr74126	transcription start site region 74126	1425 bp upstream
Tssr74127	transcription start site region 74127	1274 bp upstream
Tssr74128	transcription start site region 74128	1194 bp upstream
Tssr74129	transcription start site region 74129	663 bp upstream
Tssr74130	transcription start site region 74130	614 bp upstream
Tssr74131	transcription start site region 74131	403 bp upstream
Tssr74132	transcription start site region 74132	227 bp upstream
Tssr74133	transcription start site region 74133	422 bp downstream
Tssr74134	transcription start site region 74134	649 bp downstream
Tssr74135	transcription start site region 74135	732 bp downstream
Tssr74136	transcription start site region 74136	800 bp downstream
Tssr74137	transcription start site region 74137	866 bp downstream
Tssr74138	transcription start site region 74138	896 bp downstream
Tssr74139	transcription start site region 74139	930 bp downstream
Tssr74140	transcription start site region 74140	985 bp downstream
Tssr74141	transcription start site region 74141	1385 bp downstream
Tssr74142	transcription start site region 74142	1528 bp downstream