rs50410569 SNP Detail

Summary

• ID
  rs50410569
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:101315539 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCCCAGGAGG CCGAGGCAGG TGGGTCTCTT GAGTTCCAGG
  ACAGCCAGGG ATATAAAATG AGATCTTATC CAAGAAAACT AAAACAAGTA CACACAACAA
  M
  CAACCACCAT TAATAATAAT AATAATAATA ATAATAATAA TAATAATAAA ACAAAAAACA
  GACAGTCCAT AAGCTAAGTA GGACGGGCCT GGCTCCTAG                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss145557453	ENSMUSSNP4281126	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs50410569					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:101315539 () rs orientation: forward

Symbol	Name	Function Class
Clpb	ClpB caseinolytic peptidase B	within coordinates
Rr381220	regulatory region 381220	497 bp upstream
Rr652446	regulatory region 652446	174 bp proximal
Rr652447	regulatory region 652447	429 bp proximal