rs50412900 SNP Detail

Summary

• ID
  rs50412900
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:20773134 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A CAGTGGAACA CTGCTCATCA ATGTAAGGGG AAACAGTTGA
  AGCAGTACGA ATGTAGCTAA ACACTTGCAA AATCAAAGAC GCCAACTCTA AGACATTATG
  R
  GGTGAATGAA TGAAGTGACT CTGTCATTTA CAAGCTATAG CAGGGGAGAC AGATCACTGG
  GCTGCCTGAC CTAAGTTAGA AGTTGGAGAC ATTTTTATAT A                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	MSM/Ms
ss131781686	ENSMUSSNP594363	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	MSM/Ms
rs50412900					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:20773134 () rs orientation: forward

Symbol	Name	Function Class
Gm32213	predicted gene, 32213	1972 bp downstream
Lgalsl	galectin like	442 bp downstream
Rr443482	regulatory region 443482	235 bp proximal