rs50412948 SNP Detail

Summary

• ID
  rs50412948
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:141065100 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTACTACTGG CTTTTAAGTG
  ATTGAGTCAA AGAAAGAGGT ACTCTAAGAT ATGCCAGCCC TCTGGTTCCA CGCAGATTAG
  TAGATAATGG AAATGTTCTT TCTGTATAGC TTCTCATTAG GGTTCCCAGC CAGAGTTGCC
  TATGTCTATT ATAACTCAAA TGTTCAGATG GGCTTCCTCC ACTTTCTATC TTCCCTGCTT
  Y
  ATGAAGCCGA GGTTCTGAAT GAAAAGGGCA TGTGTCCTAA TGGAATTCTC CCCTGGGGCA
  CATCAAGTCA TTTTATACAA TGACACACTA AGAAAGGCAA TTGATGGTGT GTGACTGACT
  CTAATGTGAC TTTTCCATCA TTTCATTTGT TTTCCATTAG CCAGAAAGAA AGACATAAGA
  ACTACATAGA AATCTTTTTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss145607226	ENSMUSSNP1023413	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs50412948					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:141065100 () rs orientation: forward

Symbol	Name	Function Class
Rr419889	regulatory region 419889	within coordinates