rs50430672 SNP Detail

Summary

• ID
  rs50430672
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:118688393 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTCTATTTT CATACTCTGC
  ATCCCCATCC ATCTTCATCA GATACCCCCC ACCCCCAGCC CTGCCCAGCC CAGCCCAGCC
  CAGCCCAGCC CAGCCCAACC CAGCCCAGCC CAGCCCCCAC CCCGCCCGTG CCATTTCCTA
  TGGAACCTTT CTTAATCGAC TGCTCTTTCA GTCTTCTACA GACAGCCAAG GAGAGCCCAT
  W
  TCCTTGTGAA ACTTTCTTCT CCTGAAGATC CCTCAGTCAC ATCCTTGCAC CCGAGATAAA
  GGACATAAAA CTTCACATCA CCCACAGACG AGGCTTGGCC CGGTTTGGCA CGTGAGCATT
  GCAGCTTAGT CTCACACCAA GGTCCTCACT CTCTGGGCTC CACAAGGGCC ATCCTTCGGC
  TGCTTGCTCA ACGTCATGTC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	CAST/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61322053	NES16929560	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	A	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	CAST/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs50430672					SNP	T	T	T	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61322053	NES16929560	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:118688393 () rs orientation: forward

Symbol	Name	Function Class
Gm67702	predicted gene, 67702	393 bp downstream
Rr226050	regulatory region 226050	208 bp proximal
Rr226051	regulatory region 226051	1209 bp proximal