rs50433440 SNP Detail

Summary

• ID
  rs50433440
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:21766663 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAGTT CTGTATTGTT TCTTTTTTTT
  W
  TTAAGATTTA ATTTTATTAT TTTAA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	MSM/Ms	SM/J
ss146950471	ENSMUSSNP6893869	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		T
ss323269393	CHEV_10_21610570	CHEVERUD	SCREENING_POP	f	SNP		A		T
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	MSM/Ms	SM/J
rs50433440					SNP	T	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:21766663 () rs orientation: forward

Symbol	Name	Function Class
Rr428788	regulatory region 428788	1164 bp distal
Sgk1	serum/glucocorticoid regulated kinase 1	within coordinates