rs50434827 SNP Detail

Summary

• ID
  rs50434827
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:127544240 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGGGAATCAT TCCTTTGTAA CTCCACTGTC AGGACCATTT
  CTCCTGCCAG CCCTGCAGGA CTCCAACCTC TAACATGCTC CAGGTTATTT GCGGAGCTGC
  R
  GTAGCAGAAC TCCATGCAGC CCCAGCCTCC TGCTCCACAT ACCTTCTCTG TGTCTCATCT
  TTGTTTCTTA AGAGGACAGT TGCCTTGGCC TGGGGCTTT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147538493	ENSMUSSNP5907389	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs50434827					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:127544240 () rs orientation: forward

Symbol	Name	Function Class
D2Dcr72	DNA Segment, Chr 2, Derry C. Roopenian 72	188 bp proximal
Gm10765	predicted gene 10765	within coordinates
Tssr20034	transcription start site region 20034	93 bp upstream