rs50437085 SNP Detail

Summary

• ID
  rs50437085
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:35946914 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AAAACAAAT TGTATGTGTG TGtatattta
  ttttatatgt atgcctgctc tgtctgcatg tatgtcaccc agaagagggt gttgtattct
  ctgaaactgg tttcaaacag ttgacggcta tcatgcagat gtacgaagag aacctggatt
  Y
  ttttttttga agaacagcta gtgttcttaa ccactgagaa atctcaccag GAGTAAGAAC
  AAATTCTTAT TACACACTGA TCTTACAACA ATCTGTTAAG CAGATGTTTA ATGAGAACTG
  TAAAAGTAAA AAGCAGCAAA GAACATTTTA                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss149156746	ENSMUSSNP379935	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
ss322587377	CHEV_8_36542814	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs50437085					SNP	C	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:35946914 () rs orientation: forward

Symbol	Name	Function Class
Eri1	exoribonuclease 1	within coordinates
Rr662194	regulatory region 662194	224 bp distal
Rr662195	regulatory region 662195	321 bp distal
Rr662196	regulatory region 662196	226 bp distal
Rr662197	regulatory region 662197	65 bp distal
Tssr80937	transcription start site region 80937	799 bp downstream