rs50439749 SNP Detail

Summary

• ID
  rs50439749
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:156032148 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGATC TTACACAGAC GTACACGCAG
  K
  CAAACCACCA TTTTTAAAAA AGCCA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss148068095	ENSMUSSNP6930218	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs50439749					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:156032148 () rs orientation: forward

Symbol	Name	Function Class
Rr568204	regulatory region 568204	1305 bp distal
Rr568205	regulatory region 568205	within coordinates
Rr568206	regulatory region 568206	1270 bp proximal
Rr568207	regulatory region 568207	1483 bp proximal