rs50442020 SNP Detail

Summary

• ID
  rs50442020
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:129124868 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCACAGAAG AAGAGAAAAC
  ACAGCCAGGC TTTTCTTCTT AGATGAACAC CTAAGGACCC GTCATATCTT TTGTAATTTT
  CGTTACGATT CTTCTCCAGT AAACTGCACG AAATAACAAT TGACACTTAA TGTAATTGTC
  ATTGCAAATG AAATTGTCAT CCCTTGTGAA ATCACTGTGA TATAGCCCCA AAACACCAGT
  R
  GTGAAATTTA TCAAATACTT ATATTCATAA ACCTCTGAGG CACTTTGTGT GGATGTGTAG
  AGTCAGATGC AGTTGCGATT TATCCCGGTG TCATTAATAA ATTCTCTACA ACTGGCATTG
  TATTTACAAT TATTCACTAT TACTGAATTC TCTACAACTG GCATTGTATT TACAACTTCG
  AGTTGGTGAT ACATTTTCAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss135885746	ENSMUSSNP629826	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs50442020					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:129124868 () rs orientation: forward

Symbol	Name	Function Class
Enpep	glutamyl aminopeptidase	within coordinates
Tssr1044	transcription start site region 1044	1054 bp downstream
Tssr1045	transcription start site region 1045	1305 bp downstream
Tssr35615	transcription start site region 35615	1494 bp downstream