rs50442110 SNP Detail

Summary

• ID
  rs50442110
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:107342613 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGAATCTC AGCTTCACCT
  CTTTCAGGAC TGTGACTTTG AAAGTATGAA CTTACATGTC ACGCTGCATT TTTTTCTCTG
  TGGAGCAAAC TGTTACACCA GTCTCAGAAT GCCCTTCCAT GAGCACTGCA CACATCTCAG
  GCGAAACGCA TGCGTGCTGT TTGTAAATTA TTCCCCTAAC CCCTTGGTTA AAAGAACAGG
  S
  CCTCGGGCTG GAGAGATGGC TCAGCGGTTA AGAGTGGTAA AGATGACTGC TCTTCCAGAG
  GTCCTGAGTT CAATTCCCAG CAACCACGGG GTGGCTCACA ACCCTCTGTA ATAGGATCCA
  ATACCTTCTT CTGGTGTGTC TGAAGACAGC TGCAGTGTAC TCATATACAT TAAATAAATA
  AATAAATAAA TAAATAAATA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss135583990	ENSMUSSNP3550440	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs50442110					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:107342613 () rs orientation: forward

Symbol	Name	Function Class
Rr582971	regulatory region 582971	1203 bp distal
Rr582972	regulatory region 582972	1172 bp distal
Rr582973	regulatory region 582973	1168 bp proximal