rs50449477 SNP Detail

Summary

• ID
  rs50449477
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:56530089 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                      A AATCCATTAA TTTCATCAAC TATATAGACA AACTGAAAGA
  AAAAAAAATC TCATGATCAT CTCCTTACAT TCAGGAAAAG CATTTGACAA AATACAACAG
  A
  CTTTCATGTT AAAAGTATTG GAGAGATCAG GATTTCAAGG CCAATACCTA AACATAATAA
  AAGCAATATA CAGCAAACCA ATAGCCAGTA TCAAATTAAA T                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss134404064	ENSMUSSNP6300433	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs50449477					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:56530089 () rs orientation: reverse

Symbol	Name	Function Class
Gm66844	predicted gene, 66844	1934 bp downstream
Tssr93379	transcription start site region 93379	1932 bp upstream