rs50449945 SNP Detail

Summary

• ID
  rs50449945
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:117102892 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCATGTATG GGGTCTCATT
  TCTCTCTTGA GAGCTGCTAA GGTCTAATAA GAGTAAGCTA AGTGTGTGTT CTCTTCTAGA
  AAGTGGAGGC CCTTGCTATG CTTTGGGATG GGCTCTCTGG CTGTAGAGGA AAGGGAGCCT
  TTCAGGAAGA ATTGCAGAGG CCAGGAATTC TTAGGCAATT GCTTAATGAT GTGAGAGACT
  K
  GGAAGTATCT ACCATGGGTG TGGTGGTACC GTGGACAGCA AAGGAGACAA GCAGCTCCCC
  CTGGAAGACA GCAGTGTCTA GACAAACATG ATTGGCAGGA AGAGGAATAC CCCAGAGTCT
  TCTGTGTGGT GCCAGAAGGC AGGATGGCAT GGTGCACAGT GAGCCTCAGT CACCCCCTTT
  GGATCACTAA AGCAAGTATA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss133580052	ENSMUSSNP6586692	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs50449945					SNP	G	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:117102892 () rs orientation: forward

Symbol	Name	Function Class
D6Mit367	DNA segment, Chr 6, Massachusetts Institute of Technology 367	1300 bp proximal