rs50458519 SNP Detail

Summary

• ID
  rs50458519
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:28906337 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTACA CCCTGGTCCT CACAGACCCC
  G
  ATGCTCCCAG CAGGAAGGAT CCCAA                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss147045108	ENSMUSSNP2917911	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs50458519					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:28906337 () rs orientation: forward

Symbol	Name	Function Class
Gm9824	predicted pseudogene 9824	within coordinates
Gm30619	predicted gene, 30619	1790 bp downstream
Gm68174	predicted gene, 68174	within coordinates
Rr429457	regulatory region 429457	232 bp distal
Rr429458	regulatory region 429458	124 bp distal
Tssr92858	transcription start site region 92858	223 bp downstream
Tssr92859	transcription start site region 92859	396 bp upstream