rs50462777 SNP Detail

Summary

• ID
  rs50462777
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:69017302 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCAAA TCTTGGAAGA AAACAAATAC
  Y
  TATGCTGAGT AAGAAGATGA CAGCA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss52647682	NES15469370	PERLEGEN	MM_PANEL2	f	SNP		T		T		C	T	C		T
ss144529307	ENSMUSSNP7080855	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		T
ss324398728	CHEV_13_69008061	CHEVERUD	SCREENING_POP	f	SNP					T				T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs50462777					SNP	T	T	T	T	T	C	T	C	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52647682	NES15469370	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:69017302 () rs orientation: forward

Symbol	Name	Function Class
Adcy2	adenylate cyclase 2	within coordinates
Rr277015	regulatory region 277015	502 bp distal
Rr280122	regulatory region 280122	1072 bp proximal