rs50468717 SNP Detail

Summary

• ID
  rs50468717
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:20705259 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATTCCACAA CTAGTGTAGC
  TCTAGTAAAT CAGTATTTAA AAATAAAGCC TCTTTGTAGG AATTATCATT TGCTGGAGCT
  ATCCTCCAGT TTTGCACACA CTAGTATATG TATATCCTGT ATAGACAGCA AAAAATGAAT
  TTTTCTAGGC CAAAATTTTA CCAAGTGATT GATTCAATGG GAAAACAGGT AAGAGTATTA
  S
  AGTCTATGCA AGTAAAAGTC TAAGATAAAT CACAAAGTGT AAGGTGCATA CAGACCAGGA
  TACTGCAGGG TCAGTTGAAA TATTAGATGT AGTTGTTTAA GAATGAAGTA TTCGGGGGTA
  GGATTACTCA TGGAAAGCTC TGGGTAATGC TACAATCAGT GAGGACACCA GAGTGAAGAC
  TGAAGAGGCA TGTAAGAGAG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss146939594	ENSMUSSNP5433847	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs50468717					SNP	G	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:20705259 () rs orientation: forward

Symbol	Name	Function Class
Gm33510	predicted gene, 33510	within coordinates
Gm48651	predicted gene, 48651	within coordinates
Rr428595	regulatory region 428595	896 bp distal