GTGAA ATCCTCAAAG AACTAATGAA R CATTTAAAAA GGTAAACTCC TATCA R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
129X1/SvJ |
AKR/J |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
LG/J |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss52287001 | NES15353652 | PERLEGEN | MM_PANEL2 | f | SNP | G | G | G | G | A | G | G | G | A | G | G | |||
ss137142620 | ENSMUSSNP1185826 | ENSEMBL | ENSEMBL_Sanger | f | SNP | A | |||||||||||||
ss323899613 | CHEV_12_12540926 | CHEVERUD | SCREENING_POP | f | SNP | A | G | ||||||||||||
SNP Consensus Information | |||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
129X1/SvJ |
AKR/J |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
LG/J |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
SM/J |
||||
rs50472626 | SNP | G | A | G | G | G | A | G | G | G | A | A | G | G | G |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss52287001 | NES15353652 | PERLEGEN | MM_PANEL | f | SNP | A/G |
Location: Chr12:12584121 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Rr266589 | regulatory region 266589 | 481 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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