rs50480372 SNP Detail

Summary

• ID
  rs50480372
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:33152834 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAGTAACCT GGCAAAGAAC
  CAGCCTCCCT GTCCAGATGC AAAGAGCCAG AAGGTTCCCG TTGATCTTAT TGTTCTCTGA
  GACGCAGAGA AGGTCCCAAG GGTGGCACAG GGGGAGTAGG AGCTTGAGCT TTGGTGTTGG
  GCCTGCCTGT GATCTTGCTC CTCCTGACCC TTGCTTTGTG ACTCAAAGCA GAATCCTTAA
  C
  TGTTCCCCAT CTGAAAACAG TGTGAGGAAC TGATCAGGGG GACCAAAGAC GATCCTTTGT
  GTAAGTTCTC CGTGTGACAG ATGTTCCCAA CAGTGATTGC ATGCTACATC GACTCGTCGA
  GCCTGGAACA GTCAGGATCT CCCTGTTTAA AGCTGAGGCC TTTCCACTGT CTGTAAGTGG
  AAATAAACAC GGGGGGGGGG                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss137582133	ENSMUSSNP3276657	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs50480372					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:33152834 () rs orientation: forward

Symbol	Name	Function Class
Gm59430	predicted gene, 59430	within coordinates
Rr464869	regulatory region 464869	112 bp distal
Rr464870	regulatory region 464870	within coordinates