rs50482724 SNP Detail

Summary

• ID
  rs50482724
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:125569547 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTAAGAGAAG GAGATAGGTG ATGCTTGCCT AGCATGCATG
  AGGCCATGGG TTTCGTCCCT AGTACCATTG GTGGGGGTAG AAAAGCCATT AATGTGAGAG
  T
  GGGCTCTTCA GTAAGCTGTG CCATTTTCTT ATCTATAAGA TGGGCACCAT AGGGCTGGGG
  CAGGCTCATA TTCCTCCAGA CCAGGTTCTA AAGTTAGTG                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss147486135	ENSMUSSNP189340	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs50482724					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:125569547 () rs orientation: forward

Symbol	Name	Function Class
D2Dcr70	DNA Segment, Chr 2, Derry C. Roopenian 70	1892 bp distal
D2Mit398	DNA segment, Chr 2, Massachusetts Institute of Technology 398	1889 bp distal