rs50488754 SNP Detail

Summary

• ID
  rs50488754
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:11346643 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                      G AAGCTGGAGC TATCTTTGAC TCTGTTGCCT GCCTTTGAGA
  TCCGTTTCTC CTACTGGGTT GCCTAGTCTA GCCTTAATAA GAGAGGATGT GCCTAGTCTT
  R
  CTGCAACTTG ACATGCCATG GCTGGTTGAT ATCCACAGGA GGCCTGCTCT TTTCTGAAGA
  GAAATGGAGG AGCAGTGGAT TGGGGAAGAG GAAGGGGGAG G                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135229079	ENSMUSSNP4460823	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50488754					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:11346643 () rs orientation: reverse

Symbol	Name	Function Class
Ms4ac	membrane-spanning 4-domains, subfamily A cluster	within coordinates
Rr544325	regulatory region 544325	1963 bp proximal