AGAAATAATT CTTGCCATAG ACCTTACTTC CACCTGATTG TCCCTGTCTT CACAGCTCTA GCCTAGAGGC TACCATCAAT GAAAAACACC TGTGTGAGAA W AAGAGGGCCC TGGGGACTAT ATGCACTAAA CTTCAGTATC AGAGGTCTGA TGGGGAGTGT GGTGGGTCAG CTCGTGGAGG AAAAGAACCC TTACAATGGA W = A/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss52288614 | NES15304580 | PERLEGEN | MM_PANEL2 | f | SNP | T | T | T | T | T | T | T | T | T | T | T | T | A | T |
SNP Consensus Information | |||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
PWD/PhJ |
WSB/EiJ |
||||
rs50491860 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | A | T |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss52288614 | NES15304580 | PERLEGEN | MM_PANEL | f | SNP | A/T |
Location: Chr10:51370667 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm40645 | predicted gene, 40645 | within coordinates | ||||||
Gm49339 | predicted gene, 49339 | within coordinates | ||||||
Lilrb4a | leukocyte immunoglobulin-like receptor, subfamily B, member 4A | within coordinates | ||||||
Tssr93270 | transcription start site region 93270 | 1830 bp downstream | ||||||
Tssr93271 | transcription start site region 93271 | 1712 bp downstream | ||||||
Tssr93272 | transcription start site region 93272 | 1657 bp downstream | ||||||
Tssr93273 | transcription start site region 93273 | 1386 bp downstream | ||||||
Tssr93274 | transcription start site region 93274 | 853 bp downstream | ||||||
Tssr93275 | transcription start site region 93275 | 720 bp downstream | ||||||
Tssr93276 | transcription start site region 93276 | 666 bp downstream | ||||||
Tssr93277 | transcription start site region 93277 | 618 bp downstream | ||||||
Tssr93278 | transcription start site region 93278 | 582 bp downstream | ||||||
Tssr93279 | transcription start site region 93279 | 426 bp downstream | ||||||
Tssr93280 | transcription start site region 93280 | 10 bp upstream | ||||||
Tssr93281 | transcription start site region 93281 | 50 bp upstream | ||||||
Tssr93282 | transcription start site region 93282 | 74 bp upstream | ||||||
Tssr93283 | transcription start site region 93283 | 151 bp upstream | ||||||
Tssr93284 | transcription start site region 93284 | 485 bp upstream | ||||||
Tssr93285 | transcription start site region 93285 | 710 bp upstream | ||||||
Tssr93286 | transcription start site region 93286 | 824 bp upstream | ||||||
Tssr93287 | transcription start site region 93287 | 1186 bp upstream | ||||||
Tssr93288 | transcription start site region 93288 | 1446 bp upstream | ||||||
Tssr93289 | transcription start site region 93289 | 1514 bp upstream | ||||||
Tssr97556 | transcription start site region 97556 | 60 bp upstream | ||||||
Tssr97557 | transcription start site region 97557 | 263 bp downstream | ||||||
Tssr97558 | transcription start site region 97558 | 1450 bp downstream | ||||||
Tssr97559 | transcription start site region 97559 | 1920 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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