rs50510208 SNP Detail

Summary

• ID
  rs50510208
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:94071538 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGGACTGAA GAGAGCAGAG
  AGCGGAGATT ATGTTGTGTA GTGAGGGGCC ATGAGGGCAA GAGAGAGAAG TAGAGGGGAC
  CTAGGGGAAA TGGAAGGAGG GTGCAGACTC CTAGGAGTGC TAGGAGATGG GCTGCTTCTC
  AAAAAACTCA CAGAGAGTCA CTAAGACTTA TTTAACTGGA CCCTGAGGGT GGATACAAGG
  W
  TTCCATGAGA AAGCCAAAGG ATACTAAGGG GGGTGGAGAG CAGGAAGAGA GAGAGATTGA
  GAGAGAGAGA TGGGAGGGGG AGGGGTGGGG AAGGGGAGGA GAGGGGAAGG GAGAGGGGGG
  AGAGAGGAAG AGAGAGAGAA CTGCCCATGT AGTGGCCATG AGATACAAGG GACTGCCTGT
  GTTTGGGAAC ATTTTGGGGT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss132635196	ENSMUSSNP3840416	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T
ss323812237	CHEV_11_94042026	CHEVERUD	SCREENING_POP	f	SNP			T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs50510208					SNP	A	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:94071538 () rs orientation: forward

Symbol	Name	Function Class
Tssr110134	transcription start site region 110134	370 bp upstream