rs50512203 SNP Detail

Summary

• ID
  rs50512203
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:75989818 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T CTCCAGGGGT CAGAACTGTG TGAAATTCTC TTCCTGTGAG
  GTGGGTTTCT CCACTGACTA GCACCAGGAT TTCAGCCTTT CCCAGCTCTG GTTTGGGGTG
  G
  AGGTGGGGGT GGGGGTGTGT TTGAGGTTCT TTGTTTTTAC ACAGTCTGAT AGCTAAAGGG
  AGAGGCATGG GTGGTCTTTT TAGAGTATCC CCTTTCCTGG G                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss144639167	ENSMUSSNP4964840	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50512203					SNP	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:75989818 () rs orientation: forward

Symbol	Name	Function Class
Glrx	glutaredoxin	within coordinates
Rr482793	regulatory region 482793	1779 bp distal
Rr482794	regulatory region 482794	270 bp proximal
Tssr120401	transcription start site region 120401	1818 bp downstream
Tssr120402	transcription start site region 120402	1771 bp downstream
Tssr120403	transcription start site region 120403	1655 bp downstream
Tssr120404	transcription start site region 120404	1614 bp downstream