rs50530121 SNP Detail

Summary

• ID
  rs50530121
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:38333650 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTGATCTTG TGTGGACAAG
  TATGCGGAAT GGACTTGAAC AAAAAACAGA ACAAAGTTGA GCCTGGTGGA GCAGGCCTGT
  TGTTCCAGGT GCAGGGGGAG GTGAGATAGG AGGACCCAGG TTCAATTCCC TGCTGCAACT
  TGTTTCAGAG CAACTGTTTA TAACTCTACC CACCCAGAGA TTCCAACACT CCTTTTCAGC
  G
  CTCATGAGCA CTATACCCTT GATGCACAAA CACACCTGCA GGCAAAATAC CCACACACCT
  AACATTTAGA AGTAAAACAT CAATAAATAA CAAGTAAAAC TGGGGCTATG AATGGAGCTC
  AGTGGTACAC TGTCCGCTCA ACCTGCATAG AGCCTTGGAT TTCACTCTAA ATGCCATAAA
  GAAAGTAACC CCCACACAAG                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss134829227	ENSMUSSNP5027260	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G
ss320717638	CHEV_3_38178423	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs50530121					SNP	G	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:38333650 () rs orientation: forward

Symbol	Name	Function Class
Rr575652	regulatory region 575652	520 bp proximal