rs50530840 SNP Detail

Summary

• ID
  rs50530840
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:16425362 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCTCTCCTG CTCTGGCTTT
  CTCCCTATCC TTATCTCTCT CCCTCAGCAC ATGACACCCT GTACTAACCT CATCATGAGA
  AAGAACATAA GTCCTAACAA AGATGCCAGC ATTTGATCTT GGTGTTCCCA GCCTCCATAG
  CTGTGAATTA ATAAATTCCT TATTAGAAGG ACTCCCAGGT CCTTCTAAGA CAAAGACTAC
  R
  AATGCATCCT GAGCCAAGCA CATGTGTGAA GCGATGGGTA GTACATGGAT GATGCTCAGG
  GCTCTGTGAC TGACAGCCTA TCTGACTTCA CCCCTACAGG CAAAGCTCAT CAATGGCCTG
  CTTCTCTTCA GATTTCTGTG GCTCCTCAGT AGTGACACTG CCCTACCCAC AGCCACCCAT
  GCACCAGTCT TAGTGGCCAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	MOLF/EiJ	PWD/PhJ
ss61574876	NES17524934	PERLEGEN	MM_PANEL2	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	DBA/2J	MOLF/EiJ	PWD/PhJ
rs50530840					SNP	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61574876	NES17524934	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:16425362 () rs orientation: forward

Symbol	Name	Function Class
Gm36372	predicted gene, 36372	within coordinates
Rr269311	regulatory region 269311	337 bp distal
Rr386910	regulatory region 386910	13 bp downstream