rs50532206 SNP Detail

Summary

• ID
  rs50532206
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:105247811 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGTGATGTCA CTAGAGGCTT GTTCTATGTA TACAACATAC
  ACATTTTGTC CTATGCAAAG AAACAATGCC TGAGACATCT CAGCTCAAAT CTGAGACTGC
  K
  GTGTGAACTT CAGTGTGCTC ACTCTATGTA CAAAGTCTTA TTGCTCTTTC AAAAATATAA
  CAGCGAGACT ACAAAAAAAA ATAAACTAAG AAATTTTTC                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss147499355	ENSMUSSNP233969	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T
ss323448201	CHEV_10_104849006	CHEVERUD	SCREENING_POP	f	SNP			T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs50532206					SNP	G	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:105247811 () rs orientation: forward

Symbol	Name	Function Class
Gm66627	predicted gene, 66627	1345 bp upstream
Tmtc2	transmembrane and tetratricopeptide repeat containing 2	within coordinates