rs50532543 SNP Detail

Summary

• ID
  rs50532543
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:111860470 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTATTTAAG AATGTGTAAT
  AGAGATGGTA AAGGATTGCG TTTCCGTGTT AAAGGAAACC TATCCTGTCC AAACCTCACC
  CACAAAGGCA TTGCAAGTTT CTATCTTTCT GGGGTTTACC TTTGTCTGAC CTTGGCTCCT
  TGCTTTCTGC TCTATTGGGG ACAATGGCAG GTGAGAAGTC GGGTGATTGA TATATGGGAA
  G
  AAGCAAATGC AAACTGCCCA CACTGGGATT GTTCTTTGTC AACACACATA GTTGGCTGTA
  AATGCAGTAT TTCCATTAAC ACCATATGTT AGACAATTAA TTGTATCTAT TGGATCAAAG
  TCTTAGTTTC TTCTTACCTA CTGTGGAAGC TAGTGAGCAG AATCACTGTA TTTAGTGGGT
  CCCATATAAA GATGAAACCA                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss134277749	ENSMUSSNP4833513	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs50532543					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:111860470 () rs orientation: forward

Symbol	Name	Function Class
Rr2637	regulatory region 2637	470 bp distal
Rr6449	regulatory region 6449	718 bp distal