rs50546013 SNP Detail

Summary

• ID
  rs50546013
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:61694238 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TAGATTAGAT TTGGGTGGGT GGGATTTGGT ATGAGACTGA
  AGGAAAGGCC ATTCAGATAC TGCCCCATGT GGGGATCCAT CCCATATAGA GTCACCAAAC
  M
  CAGACACTAT TGTGGATGCT GGGAAGAGCT TGCTAACAGG AGCCTGATAT GGCTGTCTCC
  TGAGAGGCTC TGCCAGAGCC TTATGAATAC AGAGGTGGA                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss144765020	ENSMUSSNP5913391	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs50546013					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:61694238 () rs orientation: forward

Symbol	Name	Function Class
Gm72932	predicted gene, 72932	within coordinates
Mir344f	microRNA Mir344f	1691 bp downstream
Rr647584	regulatory region 647584	1426 bp proximal
Tssr72743	transcription start site region 72743	1754 bp downstream