TTTAT GGAGGGATGA TCGTATGCAT R TGATGCTACT GAGCCTGATG TGTTG R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | A/J |
CAST/EiJ |
DBA/2J |
LG/J |
MOLF/EiJ |
PWD/PhJ |
SM/J |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss52363858 | NES15389131 | PERLEGEN | MM_PANEL2 | f | SNP | G | A | A | G | ||||
ss137553593 | ENSMUSSNP5264619 | ENSEMBL | ENSEMBL_Sanger | f | SNP | G | G | ||||||
ss323988627 | CHEV_12_31162691 | CHEVERUD | SCREENING_POP | f | SNP | G | G | ||||||
SNP Consensus Information | |||||||||||||
SNP | Consensus Type | A/J |
CAST/EiJ |
DBA/2J |
LG/J |
MOLF/EiJ |
PWD/PhJ |
SM/J |
WSB/EiJ |
||||
rs50558003 | SNP | G | G | G | G | A | A | G | G |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss52363858 | NES15389131 | PERLEGEN | MM_PANEL | f | SNP | A/G |
Location: Chr12:30527825 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm28806 | predicted gene 28806 | 1376 bp downstream | ||||||
Tssr113087 | transcription start site region 113087 | 1237 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
||
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support. |
last database update 12/17/2024 MGI 6.24 |
![]() |
|